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OmicsAnalyst 2.0
Visual, statistical and functional integration of multi-omics data for mechanistic insights
Try the new module-based workflow → Under development
See example results →
Free for academic and commercial use — start analyzing in minutes.
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Describe your study; OmicsAnalyst offers the analyses your data can answer and plans the steps.
  • ✓ Group comparisons, paired designs and time courses
  • ✓ Individuals and time points read from sample names
  • ✓ Each layer harmonized before integration
  • ✓ Paired, covariate-adjusted tests
Integrate and interpret
Every result explained and checked, whichever method produced it.
  • ✓ Factors, subtypes, networks and biomarker panels from established methods
  • ✓ Each tied to your metadata, adjusted for covariates
  • ✓ Pathways tested against shuffled samples and random gene sets
  • ✓ Warnings for likely artefacts; stability on resampled data
Anchor it in genetics
Link the features behind a result to public QTL and GWAS evidence.
  • ✓ eQTL, pQTL and mQTL support for each factor
  • ✓ Colocalized GWAS loci
  • ✓ Variant → gene → protein / metabolite mechanism chains
  • ✓ No genotype data needed
Also: correlation and knowledge networks · mediation · meta-analysis across studies · multi-platform metabolomics

Recent Publications

Nature Protocols (2024)

Ewald J., Zhou, G., Lu, Y., Kolic, J., Ellis, C., Johnson, J.D., Macdonald P.E. and Xia, J. "Web-based multi-omics integration using the Analyst software suite" doi: 10.1038/s41596-023-00950-4


Nucleic Acids Research (2021)

Zhou, G., Ewald, J. and Xia, J. "OmicsAnalyst: a comprehensive web-based platform for visual analytics of multi-omics data" doi: 10.1093/nar/gkab394

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